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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931076.1_cds_XP_016477982.1_69657
CDS Infomation

[gene=LOC107799389] [db_xref=GeneID:107799389] [protein=mitogen-activated protein kinase kinase kinase YODA-like] [protein_id=XP_016477982.1] [location=complement(join(13763..14027,14140..14243,15131..15367,15473..15580,15659..15718,16141..16216,16314..16474,16636..16698,16899..16986,17131..17448,18191..18552))] [gbkey=CDS]
Sequence

ATGCCTGCTTGGTGGGGAAAAAAATCCACCAAAAACAAAGAAACACAATCTAAAGAAAAA
GAAAGAGATAAGTATGTTAAACCAAGGAGTTTTGATGAGGTACTATGTAGAAATTCACCT
AGAAATAGTAAAGATTTAAACTTTGGTGGTTCTGGTTGTGGGTTTTCTGGTTCTGGATTT
TCTGGGTTTGATTCAGGTTCATCTTTAGATAAAGCTCATCCTTTACCTAGACCTTCAGTG
GGAAATGATCAAGGGGTTGTTTTGGGATGTGGGTCAGTTTCAGTTTCAAGCACTAGCTCA
TCTGGATCATCTGATGGGCCTGTTAATACTACTGATCAAGCCCAATTTGATACTTTATTC
AGAGGAAATGGAGATAATAGGTTGAGCCCACTGTCGCGAAGCCCAGTTCGTTCTAGAGGG
ACAACTACCACGTCGTCACCTTTACATCCTCGGTTTTCGAGTATTAATCTGGACTCTCCA
ACGGGCAAATTGGATAATGATGTGAGGAGTGAATGTCATCAGCTGCCACTTCCACCTGGT
TCCCCACCCAGCCCTTCTGCTTTGCCAAACCCAAGACCCTGTGGTGTCGCTGAAGGCTCA
ACAGTTAATATGTCAAAATGGAAGAAAGGCAGACTCCTGGGAAGAGGCACATTTGGGCAT
GTCTATCTTGGTTTCAACAGGGAGAATGGACAAATGTGCGCAATAAAAGAAGTCAGGGTG
GTTTCAGACGATCAGACATCGAAAGAGTGTCTTAAGCAATTGAACCAGGAAATCATTTTA
CTCAGTAACTTGACACATCCAAATATTGTTCGATACTATGGAAGTGAACTGGATGAAGAA
ACTCTATCAGTTTACTTGGAATACGTTTCCGGTGGTTCTATACATAAATTGTTGCAGGAA
TATGGCGCTTTCAGAGAGCCAGTTATACAAAACTACACAAGACAGATCCTTTCTGGCCTT
TCCTTTTTACACGCTAGGAATACGGTTCACAGGGACATAAAAGGAGCAAATATACTAGTA
GATCCTAATGGTGAAATAAAGCTTGCTGATTTTGGCATGGCAAAACATATAACTTCGTGT
TCCTCGGTGCTCTCTTTCAAAGGGAGTCCTTATTGGATGGCTCCTGAGGTGGTGATGAAT
ACAAGTGGCTATGGCCTTCCGGTGGATATTTGGAGTTTGGGATGTACAATTCTTGAAATG
GCAAGTTCAAAGCCACCTTGGAGCCAGTATGAAGGGGTCGCTGCCATATTTAAAATTGGA
AACAGCAAAGACTTCCCTGAAATTCCAGATCACCTTTCGAATGATGCAAAAAATTTCATA
AAGTTATGCTTGCAGCGGGAGCCGTCTGCACGACCTACGGCTTCTCAACTACTAGAGCAG
CCTTTTGTGAAAAACCAAAGTACAGCAAAAGTTGCTCATGTTGGTGTAACCAAGGAAGCA
TATCCTCGTTCCTTTGATGGAAGCCGGACACCGCCAGTGTTGGATATGCAATCCGGTGGA
AGGAATATTTCTCCCTCTAAAGGAAACTATGCCAGCCATCCAGTGATCACCATCTCTAGA
CCATTGAGCTGCCCAAGGGAAATTGTAAAAACCATAACATCTTTACCGGTATCCCCAACT
TCTAGCCCATTAAGACAGTACGAACCTGCGCGTAGGAGCTGTTATCTTTCTCCGCCCCAC
CCAGCTTATGGAATCGGGGGACAGAGTGGATACGATGCGAATGATTACTCAATGTTTCAA
ACCAGGCCCACCACAAGAAGCACACTGGAACCATGGCTTGAAATCCCTCAATTTAAAGCT
CAAACACCGTCTAGATCACCAAAAACAAGACCAATTCTTTAG

Peptide Sequence

PEP ID

XP_016477982.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nicotiana tabacum]
Sequence

MPAWWGKKSTKNKETQSKEKERDKYVKPRSFDEVLCRNSPRNSKDLNFGGSGCGFSGSGF
SGFDSGSSLDKAHPLPRPSVGNDQGVVLGCGSVSVSSTSSSGSSDGPVNTTDQAQFDTLF
RGNGDNRLSPLSRSPVRSRGTTTTSSPLHPRFSSINLDSPTGKLDNDVRSECHQLPLPPG
SPPSPSALPNPRPCGVAEGSTVNMSKWKKGRLLGRGTFGHVYLGFNRENGQMCAIKEVRV
VSDDQTSKECLKQLNQEIILLSNLTHPNIVRYYGSELDEETLSVYLEYVSGGSIHKLLQE
YGAFREPVIQNYTRQILSGLSFLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITSC
SSVLSFKGSPYWMAPEVVMNTSGYGLPVDIWSLGCTILEMASSKPPWSQYEGVAAIFKIG
NSKDFPEIPDHLSNDAKNFIKLCLQREPSARPTASQLLEQPFVKNQSTAKVAHVGVTKEA
YPRSFDGSRTPPVLDMQSGGRNISPSKGNYASHPVITISRPLSCPREIVKTITSLPVSPT
SSPLRQYEPARRSCYLSPPHPAYGIGGQSGYDANDYSMFQTRPTTRSTLEPWLEIPQFKA
QTPSRSPKTRPIL

Transcript Sequence

Gene sequence data has not been registered.